What are the mandatory elements of the INSDSeq in a Sequence Listing XML?

The INSDSeq element in a Sequence Listing XML contains several mandatory dependent elements. According to MPEP 2413.01(g), these elements are: INSDSeq_length: Length of the sequence INSDSeq_moltype: Molecule type INSDSeq_division: Indication that a sequence is related to a patent application INSDSeq_feature-table: List of annotations of the sequence INSDSeq_sequence: The sequence itself These elements are crucial for…

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What are the mandatory attributes for the root element in a Sequence Listing XML?

According to WIPO Standard ST.26, paragraph 43, as cited in the MPEP, the root element of a Sequence Listing XML must have certain mandatory attributes. These are: dtdVersion: Version of the DTD used to create the file (format “V#_#”, e.g., “V1_3”) originalFreeTextLanguageCode: The language code for the original language of language-dependent free text qualifiers Additionally,…

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What are the main parts of a “Sequence Listing XML”?

The main parts of a “Sequence Listing XML” are: XML declaration DOCTYPE declaration Root element General information part Sequence data part As specified in MPEP 2413.01, “The constituent parts of the ‘Sequence Listing XML’ are identified in multiple paragraphs of WIPO Standard ST.26 and have been specifically incorporated into the USPTO rules of practice at…

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What are the main functions of the WIPO Sequence Tool?

The WIPO Sequence Tool has two primary functions: authoring and validation. As described in MPEP 2418: WIPO Sequence will allow a user to create and save (author) patent application data and biological sequence data in a project, validate the project to ensure all required information is present, and generate a “Sequence Listing XML” in compliance…

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What happens if a “Sequence Listing XML” is not submitted with an international application?

If a “Sequence Listing XML” is not submitted with an international application, the United States International Searching Authority (ISA) or International Preliminary Examining Authority (IPEA) may issue a notice requiring compliance. According to MPEP 2414.05: “Where applicant has not provided a sequence listing in accordance with Annex C of the Administrative Instructions and the USPTO…

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What fees are associated with late submission of a “Sequence Listing XML” in PCT applications?

When submitting a “Sequence Listing XML” in response to a notice from the United States International Searching Authority (ISA) or International Preliminary Examining Authority (IPEA), applicants are required to pay a late furnishing fee. According to MPEP 2414.05: “In response to such a requirement, the late furnishing fee set forth in § 1.445(a)(5) is also…

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What are language-dependent free text elements in a “Sequence Listing XML”?

Language-dependent free text elements in a “Sequence Listing XML” are parts of the sequence listing that contain descriptive text which may be in a language other than English. These elements are defined in 37 CFR 1.833(b)(3). Examples might include descriptions of genetic features or experiment conditions. When these elements are initially submitted in a non-English…

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What are language-dependent free text qualifiers in a “Sequence Listing XML”?

Language-dependent free text qualifiers are specific qualifiers in a “Sequence Listing XML” that may require translation for national, regional, or international procedures. As explained in MPEP 2413.01(h): “Language-dependent free text is the free text value of certain qualifiers that is language-dependent in that it may require translation for national, regional or international procedures.” These qualifiers…

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How should I label physical media containing Sequence Listing XML files?

How should I label physical media containing Sequence Listing XML files? When submitting Sequence Listing XML files on physical media, proper labeling is crucial. The MPEP provides specific instructions: “Physical media containing a Sequence Listing XML must be labeled as “Sequence Listing XML.” The physical media itself must be labeled with: (A) The name of…

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